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ICFP
2010
ACM
13 years 7 months ago
A certified framework for compiling and executing garbage-collected languages
We describe the design, implementation, and use of a machinecertified framework for correct compilation and execution of programs in garbage-collected languages. Our framework ext...
Andrew McCreight, Tim Chevalier, Andrew P. Tolmach
BMCBI
2006
87views more  BMCBI 2006»
13 years 7 months ago
Phylogeny based discovery of regulatory elements
Background: Algorithms that locate evolutionarily conserved sequences have become powerful tools for finding functional DNA elements, including transcription factor binding sites;...
Jason Gertz, Justin C. Fay, Barak A. Cohen
BMCBI
2011
13 years 2 months ago
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Background: Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of approp...
Daniel Glez-Peña, Gonzalo Gómez-L&oa...
BMCBI
2010
106views more  BMCBI 2010»
13 years 7 months ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron
DOCENG
2010
ACM
13 years 8 months ago
Linking data and presentations: from mapping to active transformations
Modern GUI toolkits, and especially RIA ones, propose the concept of binding to dynamically link domain data and their presentations. Bindings are very simple to use for predefine...
Olivier Beaudoux, Arnaud Blouin