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» Large scale reconstruction of haplotypes from genotype data
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SIAMSC
2008
182views more  SIAMSC 2008»
13 years 7 months ago
A Distributed SDP Approach for Large-Scale Noisy Anchor-Free Graph Realization with Applications to Molecular Conformation
We propose a distributed algorithm for solving Euclidean metric realization problems arising from large 3D graphs, using only noisy distance information, and without any prior kno...
Pratik Biswas, Kim-Chuan Toh, Yinyu Ye
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
13 years 7 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
TMI
2010
298views more  TMI 2010»
13 years 2 months ago
An Efficient Numerical Method for General Lp Regularization in Fluorescence Molecular Tomography
Abstract--Reconstruction algorithms for fluorescence tomography have to address two crucial issues : (i) the ill-posedness of the reconstruction problem, (ii) the large scale of nu...
Jean-Charles Baritaux, Kai Hassler, Michael Unser
CVPR
2008
IEEE
14 years 9 months ago
Least squares surface reconstruction from measured gradient fields
This paper presents a new method for the reconstruction of a surface from its ? and ? gradient field, measured, for example, via Photometric Stereo. The new algorithm produces the...
Matthew Harker, Paul O'Leary
SIGMOD
2009
ACM
171views Database» more  SIGMOD 2009»
14 years 8 months ago
GAMPS: compressing multi sensor data by grouping and amplitude scaling
We consider the problem of collectively approximating a set of sensor signals using the least amount of space so that any individual signal can be efficiently reconstructed within...
Sorabh Gandhi, Suman Nath, Subhash Suri, Jie Liu