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BMCBI
2010
193views more  BMCBI 2010»
13 years 2 months ago
Mayday - integrative analytics for expression data
Background: DNA Microarrays have become the standard method for large scale analyses of gene expression and epigenomics. The increasing complexity and inherent noisiness of the ge...
Florian Battke, Stephan Symons, Kay Nieselt
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
14 years 7 months ago
Turning CARTwheels: an alternating algorithm for mining redescriptions
We present an unusual algorithm involving classification trees-CARTwheels--where two trees are grown in opposite directions so that they are joined at their leaves. This approach ...
Naren Ramakrishnan, Deept Kumar, Bud Mishra, Malco...
HIS
2004
13 years 8 months ago
K-Ranked Covariance Based Missing Values Estimation for Microarray Data Classification
Microarray data often contains multiple missing genetic expression values that degrade the performance of statistical and machine learning algorithms. This paper presents a K rank...
Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence ...
BMCBI
2005
161views more  BMCBI 2005»
13 years 7 months ago
Non-linear mapping for exploratory data analysis in functional genomics
Background: Several supervised and unsupervised learning tools are available to classify functional genomics data. However, relatively less attention has been given to exploratory...
Francisco Azuaje, Haiying Wang, Alban Chesneau
BMCBI
2010
87views more  BMCBI 2010»
13 years 7 months ago
Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model
Background: Epigenetics is an important layer of transcriptional control necessary for cell-type specific gene regulation. Recent studies have shown significant epigenetic pattern...
Jessica L. Larson, Guo-Cheng Yuan