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WIOPT
2011
IEEE
12 years 11 months ago
Portfolio optimization in secondary spectrum markets
—In this paper, we address the spectrum portfolio optimization (SPO) question in the context of secondary spectrum markets, where bandwidth (spectrum access rights) can be bought...
Praveen Kumar Muthuswamy, Koushik Kar, Aparna Gupt...
AOSD
2011
ACM
12 years 11 months ago
An aspect-oriented approach for implementing evolutionary computation applications
Object-oriented frameworks support design and code reuse for specific application domains. To facilitate the development of evolutionary computation (EC) programs, such as geneti...
Andres J. Ramirez, Adam C. Jensen, Betty H. C. Che...
BMCBI
2011
12 years 11 months ago
CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation
Background: The implementation of high throughput sequencing for exploring biodiversity poses high demands on bioinformatics applications for automated data processing. Here we in...
Surendra Kumar, Tor Carlsen, Bjørn-Helge Me...
BMCBI
2011
12 years 11 months ago
PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Background: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorith...
Xin Feng, Robert Grossman, Lincoln Stein
BMCBI
2011
12 years 11 months ago
Detection of Lineage-Specific Evolutionary Changes among Primate Species
Background: Comparison of the human genome with other primates offers the opportunity to detect evolutionary events that created the diverse phenotypes among the primate species. ...
Mihaela Pertea, Geo Pertea, Steven L. Salzberg
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