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BMCBI
2010
143views more  BMCBI 2010»
13 years 11 months ago
Learning gene regulatory networks from only positive and unlabeled data
Background: Recently, supervised learning methods have been exploited to reconstruct gene regulatory networks from gene expression data. The reconstruction of a network is modeled...
Luigi Cerulo, Charles Elkan, Michele Ceccarelli
KDD
2008
ACM
137views Data Mining» more  KDD 2008»
14 years 11 months ago
Learning classifiers from only positive and unlabeled data
The input to an algorithm that learns a binary classifier normally consists of two sets of examples, where one set consists of positive examples of the concept to be learned, and ...
Charles Elkan, Keith Noto
WAIM
2010
Springer
14 years 3 months ago
Semi-supervised Learning from Only Positive and Unlabeled Data Using Entropy
Abstract. The problem of classification from positive and unlabeled examples attracts much attention currently. However, when the number of unlabeled negative examples is very sma...
Xiaoling Wang, Zhen Xu, Chaofeng Sha, Martin Ester...
BIOCOMP
2006
14 years 7 days ago
Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
Exploring gene regulatory network is a key topic in molecular biology. In this paper, we present a new dynamic Bayesian network (DBN) framework embedded with structural expectatio...
Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia
BMCBI
2011
13 years 2 months ago
Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities
Background: Gene regulatory networks play essential roles in living organisms to control growth, keep internal metabolism running and respond to external environmental changes. Un...
Yao Fu, Laura R. Jarboe, Julie A. Dickerson