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ACS
2007
13 years 9 months ago
Components of the Fundamental Category II
In this article we carry on the study of the fundamental category (Goubault and Raussen, 2002; Goubault, 2003) of a partially ordered topological space (Nachbin, 1965; Johnstone, 1...
Eric Goubault, Emmanuel Haucourt
BMCBI
2010
106views more  BMCBI 2010»
13 years 9 months ago
Multiple structure alignment and consensus identification for proteins
Background: An algorithm is presented to compute a multiple structure alignment for a set of proteins and to generate a consensus (pseudo) protein which captures common substructu...
Ivaylo Ilinkin, Jieping Ye, Ravi Janardan
BMCBI
2008
105views more  BMCBI 2008»
13 years 9 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...
BMCBI
2008
138views more  BMCBI 2008»
13 years 9 months ago
Comparative analyses of bidirectional promoters in vertebrates
Background: Orthologous genes with deep phylogenetic histories are likely to retain similar regulatory features. In this report we utilize orthology assignments for pairs of genes...
Mary Qu Yang, James Taylor, Laura Elnitski
CORR
2010
Springer
135views Education» more  CORR 2010»
13 years 9 months ago
The Power of Nondeterminism in Self-Assembly
tigate the role of nondeterminism in Winfree's abstract Tile Assembly Model (aTAM), which was conceived to model artificial molecular self-assembling systems constructed from...
Nathaniel Bryans, Ehsan Chiniforooshan, David Doty...
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