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ICML
2005
IEEE
14 years 9 months ago
Predicting protein folds with structural repeats using a chain graph model
Protein fold recognition is a key step towards inferring the tertiary structures from amino-acid sequences. Complex folds such as those consisting of interacting structural repeat...
Yan Liu, Eric P. Xing, Jaime G. Carbonell
BMCBI
2010
129views more  BMCBI 2010»
13 years 8 months ago
Automatic prediction of catalytic residues by modeling residue structural neighborhood
Background: Prediction of catalytic residues is a major step in characterizing the function of enzymes. In its simpler formulation, the problem can be cast into a binary classific...
Elisa Cilia, Andrea Passerini
ICML
2009
IEEE
14 years 9 months ago
Learning structural SVMs with latent variables
We present a large-margin formulation and algorithm for structured output prediction that allows the use of latent variables. Our proposal covers a large range of application prob...
Chun-Nam John Yu, Thorsten Joachims
ITRE
2005
IEEE
14 years 1 months ago
Structure learning of Bayesian networks using a semantic genetic algorithm-based approach
A Bayesian network model is a popular technique for data mining due to its intuitive interpretation. This paper presents a semantic genetic algorithm (SGA) to learn a complete qual...
Sachin Shetty, Min Song
ACL
2008
13 years 9 months ago
Semi-Supervised Convex Training for Dependency Parsing
We present a novel semi-supervised training algorithm for learning dependency parsers. By combining a supervised large margin loss with an unsupervised least squares loss, a discr...
Qin Iris Wang, Dale Schuurmans, Dekang Lin