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ECCB
2005
IEEE
14 years 2 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser
GECCO
2005
Springer
124views Optimization» more  GECCO 2005»
14 years 2 months ago
Evolving petri nets to represent metabolic pathways
Given concentrations of metabolites over a sequence of time steps, the metabolic pathway prediction problem seeks a set of reactions and rate constants for them that could yield t...
Jeremiah Nummela, Bryant A. Julstrom
SIGMOD
2010
ACM
324views Database» more  SIGMOD 2010»
14 years 1 months ago
Similarity search and locality sensitive hashing using ternary content addressable memories
Similarity search methods are widely used as kernels in various data mining and machine learning applications including those in computational biology, web search/clustering. Near...
Rajendra Shinde, Ashish Goel, Pankaj Gupta, Debojy...
CIDM
2009
IEEE
14 years 12 days ago
Empirical comparison of graph classification algorithms
The graph classification problem is learning to classify separate, individual graphs in a graph database into two or more categories. A number of algorithms have been introduced fo...
Nikhil S. Ketkar, Lawrence B. Holder, Diane J. Coo...
ESANN
2007
13 years 10 months ago
Toward a robust 2D spatio-temporal self-organization
Abstract. Several models have been proposed for spatio-temporal selforganization, among which the TOM model by Wiemer [1] is particularly promising. In this paper, we propose to ad...
Thomas Girod, Laurent Bougrain, Frédé...