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BMCBI
2011
13 years 4 days ago
Clustering gene expression data with a penalized graph-based metric
Background: The search for cluster structure in microarray datasets is a base problem for the so-called “-omic sciences”. A difficult problem in clustering is how to handle da...
Ariel E. Bayá, Pablo M. Granitto
IJIT
2004
13 years 10 months ago
Computing Entropy for Ortholog Detection
Abstract-- Biological sequences from different species are called orthologs if they evolved from a sequence of a common ancestor species and they have the same biological function....
Hsing-Kuo Pao, John Case
BMCBI
2005
151views more  BMCBI 2005»
13 years 8 months ago
stam - a Bioconductor compliant R package for structured analysis of microarray data
Background: Genome wide microarray studies have the potential to unveil novel disease entities. Clinically homogeneous groups of patients can have diverse gene expression profiles...
Claudio Lottaz, Rainer Spang
SIGSOFT
2007
ACM
14 years 9 months ago
Recovering and using use-case-diagram-to-source-code traceability links
Use case diagrams (UCDs) are widely used to describe requirements and desired functionality of software products. However, UCDs are loosely linked to source code, and maintaining ...
Mark Grechanik, Kathryn S. McKinley, Dewayne E. Pe...
KDD
2008
ACM
178views Data Mining» more  KDD 2008»
14 years 9 months ago
Training structural svms with kernels using sampled cuts
Discriminative training for structured outputs has found increasing applications in areas such as natural language processing, bioinformatics, information retrieval, and computer ...
Chun-Nam John Yu, Thorsten Joachims