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BMCBI
2008
147views more  BMCBI 2008»
13 years 10 months ago
Transmembrane helix prediction using amino acid property features and latent semantic analysis
Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
ESWA
2008
140views more  ESWA 2008»
13 years 10 months ago
Web taxonomy integration with hierarchical shrinkage algorithm and fine-grained relations
We address the problem of integrating web taxonomies from different real Internet applications. Integrating web taxonomies is to transfer instances from a source to target taxonom...
Chia-Wei Wu, Richard Tzong-Han Tsai, Cheng-Wei Lee...
BMCBI
2006
143views more  BMCBI 2006»
13 years 10 months ago
Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms
Background: Microarray technology produces gene expression data on a genomic scale for an endless variety of organisms and conditions. However, this vast amount of information nee...
Rainer König, Gunnar Schramm, Marcus Oswald, ...
BMCBI
2006
152views more  BMCBI 2006»
13 years 10 months ago
A two-stage approach for improved prediction of residue contact maps
Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
Alessandro Vullo, Ian Walsh, Gianluca Pollastri
BMCBI
2006
159views more  BMCBI 2006»
13 years 9 months ago
EVEREST: automatic identification and classification of protein domains in all protein sequences
Background: Proteins are comprised of one or several building blocks, known as domains. Such domains can be classified into families according to their evolutionary origin. Wherea...
Elon Portugaly, Amir Harel, Nathan Linial, Michal ...