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BMCBI
2010
142views more  BMCBI 2010»
13 years 7 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
SODA
1992
ACM
123views Algorithms» more  SODA 1992»
13 years 8 months ago
Computing Minimal Spanning Subgraphs in Linear Time
Let P be a property of undirected graphs. We consider the following problem: given a graph G that has property P, nd a minimal spanning subgraph of G with property P. We describe ...
Xiaofeng Han, Pierre Kelsen, Vijaya Ramachandran, ...
STOC
1992
ACM
122views Algorithms» more  STOC 1992»
13 years 11 months ago
Existence and Construction of Edge Disjoint Paths on Expander Graphs
Given an expander graph G = (V, E) and a set of q disjoint pairs of vertices in V , we are interested in finding for each pair (ai, bi), a path connecting ai to bi, such that the ...
Andrei Z. Broder, Alan M. Frieze, Eli Upfal
CIAC
2010
Springer
251views Algorithms» more  CIAC 2010»
14 years 4 months ago
A parameterized algorithm for Chordal Sandwich
Given an arbitrary graph G = (V, E) and an additional set of admissible edges F, the Chordal Sandwich problem asks whether there exists a chordal graph (V, E F ) such that F F. ...
Pinar Heggernes, Federico Mancini, Jesper Nederlof...
TCS
2010
13 years 6 months ago
A polynomial solution to the k-fixed-endpoint path cover problem on proper interval graphs
: We study a variant of the path cover problem, namely, the k-fixed-endpoint path cover problem, or kPC for short. Given a graph G and a subset T of k vertices of V (G), a k-fixe...
Katerina Asdre, Stavros D. Nikolopoulos