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BMCBI
2011
13 years 2 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
BMCBI
2011
13 years 2 months ago
Multivariate analysis of microarray data: differential expression and differential connection
Background: Typical analysis of microarray data ignores the correlation between gene expression values. In this paper we present a model for microarray data which specifically all...
Harri T. Kiiveri
ECCC
2011
223views ECommerce» more  ECCC 2011»
13 years 2 months ago
A Case of Depth-3 Identity Testing, Sparse Factorization and Duality
Polynomial identity testing (PIT) problem is known to be challenging even for constant depth arithmetic circuits. In this work, we study the complexity of two special but natural ...
Chandan Saha, Ramprasad Saptharishi, Nitin Saxena
JMLR
2011
148views more  JMLR 2011»
13 years 2 months ago
Multitask Sparsity via Maximum Entropy Discrimination
A multitask learning framework is developed for discriminative classification and regression where multiple large-margin linear classifiers are estimated for different predictio...
Tony Jebara
MMAS
2011
Springer
13 years 2 months ago
Scalable Bayesian Reduced-Order Models for Simulating High-Dimensional Multiscale Dynamical Systems
While existing mathematical descriptions can accurately account for phenomena at microscopic scales (e.g. molecular dynamics), these are often high-dimensional, stochastic and thei...
Phaedon-Stelios Koutsourelakis, Elias Bilionis