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» Linking Databases and Linking Cultures
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SIGMOD
2007
ACM
169views Database» more  SIGMOD 2007»
14 years 9 months ago
Genome-scale disk-based suffix tree indexing
With the exponential growth of biological sequence databases, it has become critical to develop effective techniques for storing, querying, and analyzing these massive data. Suffi...
Benjarath Phoophakdee, Mohammed J. Zaki
BMCBI
2010
163views more  BMCBI 2010»
13 years 9 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
BMCBI
2006
144views more  BMCBI 2006»
13 years 9 months ago
methBLAST and methPrimerDB: web-tools for PCR based methylation analysis
Background: DNA methylation plays an important role in development and tumorigenesis by epigenetic modification and silencing of critical genes. The development of PCR-based methy...
Filip Pattyn, Jasmien Hoebeeck, Piet Robbrecht, Ev...
ICDE
2007
IEEE
115views Database» more  ICDE 2007»
14 years 10 months ago
MultiRelational k-Anonymity
k-Anonymity protects privacy by ensuring that data cannot be linked to a single individual. In a k-anonymous dataset, any identifying information occurs in at least k tuples. Much...
Mehmet Ercan Nergiz, Chris Clifton, A. Erhan Nergi...
ICDE
2007
IEEE
117views Database» more  ICDE 2007»
14 years 10 months ago
Unnesting Scalar SQL Queries in the Presence of Disjunction
Optimizing nested queries is an intricate problem. It becomes even harder if in a nested query the linking predicate or the correlation predicate occurs disjunctively. We present ...
Matthias Brantner, Norman May, Guido Moerkotte