We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
Parallel load balancing is studied for problems with certain bisection properties. A class of problems has bisectors if every problem p of weight wp in the class can be subdivided...
Molecular Dynamics applications enhance our understanding of biological phenomena through bio-molecular simulations. Large-scale parallelization of MD simulations is challenging b...
— In this paper, we investigate the problem of grouping the sensor nodes into clusters to enhance the overall scalability of the network. A selected set of nodes, known as gatewa...