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» Logic-Based Modeling in Systems Biology
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CMSB
2009
Springer
15 years 10 months ago
Modelling Biological Clocks with Bio-PEPA: Stochasticity and Robustness for the Neurospora crassa Circadian Network
Circadian clocks are biochemical networks, present in nearly all living organisms, whose function is to regulate the expression of specific mRNAs and proteins to synchronise rhyth...
Ozgur E. Akman, Federica Ciocchetta, Andrea Degasp...
IAT
2010
IEEE
15 years 2 months ago
A Biologically-Inspired Cognitive Agent Model Integrating Declarative Knowledge and Reinforcement Learning
Abstract--The paper proposes a biologically-inspired cognitive agent model, known as FALCON-X, based on an integration of the Adaptive Control of Thought (ACT-R) architecture and a...
Ah-Hwee Tan, Gee Wah Ng
BMCBI
2008
115views more  BMCBI 2008»
15 years 4 months ago
Systems biology driven software design for the research enterprise
Background: In systems biology, and many other areas of research, there is a need for the interoperability of tools and data sources that were not originally designed to be integr...
John Boyle, Christopher C. Cavnor, Sarah A. Killco...
ECCC
2000
86views more  ECCC 2000»
15 years 3 months ago
Neural Systems as Nonlinear Filters
Experimental data show that biological synapses behave quite differently from the symbolic synapses in all common artificialneuralnetwork models. Biological synapses are dynamic, ...
Wolfgang Maass, Eduardo D. Sontag
VRML
2004
ACM
15 years 9 months ago
PathSim visualizer: an Information-Rich Virtual Environment framework for systems biology
Increasingly, biology researchers and medical practitioners are using computational tools to model and analyze dynamic systems across scales from the macro to the cellular to the ...
Nicholas F. Polys, Doug A. Bowman, Chris North, Re...