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BIOCOMP
2006
13 years 9 months ago
A Multi-strategy Approach to Protein Structural Alphabet Design
- The search for structural similarity among proteins can provide valuable insights into their functional mechanisms and their functional relationships. Though the protein 1D seque...
Shih-Yen Ku, Yuh-Jyh Hu
NIPS
2004
13 years 9 months ago
Proximity Graphs for Clustering and Manifold Learning
Many machine learning algorithms for clustering or dimensionality reduction take as input a cloud of points in Euclidean space, and construct a graph with the input data points as...
Miguel Á. Carreira-Perpiñán, ...
NIPS
2004
13 years 9 months ago
Expectation Consistent Free Energies for Approximate Inference
We propose a novel a framework for deriving approximations for intractable probabilistic models. This framework is based on a free energy (negative log marginal likelihood) and ca...
Manfred Opper, Ole Winther
WAE
2001
281views Algorithms» more  WAE 2001»
13 years 9 months ago
Using PRAM Algorithms on a Uniform-Memory-Access Shared-Memory Architecture
The ability to provide uniform shared-memory access to a significant number of processors in a single SMP node brings us much closer to the ideal PRAM parallel computer. In this pa...
David A. Bader, Ajith K. Illendula, Bernard M. E. ...
KDID
2003
93views Database» more  KDID 2003»
13 years 9 months ago
A Framework for Frequent Sequence Mining under Generalized Regular Expression Constraints
This paper provides a framework for the extraction of frequent sequences satisfying a given regular expression (RE) constraint. We take advantage of the information contained in th...
Hunor Albert-Lorincz, Jean-François Boulica...