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» MAP: Searching Large Genome Databases
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BMCBI
2011
13 years 2 months ago
AnyExpress: Integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm
Background: Cross-platform analysis of gene express data requires multiple, intricate processes at different layers with various platforms. However, existing tools handle only a s...
Jihoon Kim, Kiltesh Patel, Hyunchul Jung, Winston ...
SIGMOD
2009
ACM
213views Database» more  SIGMOD 2009»
14 years 7 months ago
Dictionary-based order-preserving string compression for main memory column stores
Column-oriented database systems [19, 23] perform better than traditional row-oriented database systems on analytical workloads such as those found in decision support and busines...
Carsten Binnig, Stefan Hildenbrand, Franz Fär...
BMCBI
2006
159views more  BMCBI 2006»
13 years 7 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
NAR
2007
135views more  NAR 2007»
13 years 7 months ago
g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
CEC
2010
IEEE
13 years 8 months ago
A modified genetic algorithm for matching building sets with the histograms of forces
Abstract--This paper presents an approach to the task of locating a group of buildings based solely on their relative spatial relationships. This situation can occur in the problem...
Andrew R. Buck, James M. Keller, Marjorie Skubic