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BMCBI
2006
100views more  BMCBI 2006»
13 years 7 months ago
Using the nucleotide substitution rate matrix to detect horizontal gene transfer
Background: Horizontal gene transfer (HGT) has allowed bacteria to evolve many new capabilities. Because transferred genes perform many medically important functions, such as conf...
Micah Hamady, M. D. Betterton, Rob Knight
KDD
2002
ACM
170views Data Mining» more  KDD 2002»
14 years 8 months ago
Enhanced word clustering for hierarchical text classification
In this paper we propose a new information-theoretic divisive algorithm for word clustering applied to text classification. In previous work, such "distributional clustering&...
Inderjit S. Dhillon, Subramanyam Mallela, Rahul Ku...
PODC
2003
ACM
14 years 27 days ago
Geometric ad-hoc routing: of theory and practice
All too often a seemingly insurmountable divide between theory and practice can be witnessed. In this paper we try to contribute to narrowing this gap in the field of ad-hoc rout...
Fabian Kuhn, Roger Wattenhofer, Yan Zhang, Aaron Z...
LCPC
2007
Springer
14 years 1 months ago
Associative Parallel Containers in STAPL
The Standard Template Adaptive Parallel Library (stapl) is a parallel programming framework that extends C++ and stl with support for parallelism. stapl provides a collection of pa...
Gabriel Tanase, Chidambareswaran Raman, Mauro Bian...
BMCBI
2010
178views more  BMCBI 2010»
13 years 7 months ago
Selecting high-dimensional mixed graphical models using minimal AIC or BIC forests
Background: Chow and Liu showed that the maximum likelihood tree for multivariate discrete distributions may be found using a maximum weight spanning tree algorithm, for example K...
David Edwards, Gabriel C. G. de Abreu, Rodrigo Lab...