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» MPI scalability of a large memory LES code
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SAC
2009
ACM
14 years 2 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
IPPS
2008
IEEE
14 years 2 months ago
On utilization of contributory storage in desktop grids
Modern desktop grid environments and shared computing platforms have popularized the use of contributory resources, such as desktop computers, as computing substrates for a variet...
Chreston Miller, Ali Raza Butt, Patrick Butler
IPPS
2007
IEEE
14 years 1 months ago
DejaVu: Transparent User-Level Checkpointing, Migration, and Recovery for Distributed Systems
In this paper, we present a new fault tolerance system called DejaVu for transparent and automatic checkpointing, migration, and recovery of parallel and distributed applications....
Joseph F. Ruscio, Michael A. Heffner, Srinidhi Var...
CIARP
2004
Springer
14 years 1 months ago
Parallel Algorithm for Extended Star Clustering
In this paper we present a new parallel clustering algorithm based on the extended star clustering method. This algorithm can be used for example to cluster massive data sets of do...
Reynaldo Gil-García, José Manuel Bad...
CSE
2012
IEEE
12 years 3 months ago
Accelerating Quantum Monte Carlo Simulations of Real Materials on GPU Clusters
—Continuum quantum Monte Carlo (QMC) has proved to be an invaluable tool for predicting the properties of matter from fundamental principles. By solving the manybody Schr¨odinge...
Kenneth Esler, Jeongnim Kim, David M. Ceperley, Lu...