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BMCBI
2005
101views more  BMCBI 2005»
13 years 8 months ago
MASQOT: a method for cDNA microarray spot quality control
Background: cDNA microarray technology has emerged as a major player in the parallel detection of biomolecules, but still suffers from fundamental technical problems. Identifying ...
Max Bylesjö, Daniel Eriksson, Andreas Sjö...
BMCBI
2005
148views more  BMCBI 2005»
13 years 8 months ago
Nonparametric tests for differential gene expression and interaction effects in multi-factorial microarray experiments
Background: Numerous nonparametric approaches have been proposed in literature to detect differential gene expression in the setting of two user-defined groups. However, there is ...
Xin Gao, Peter X. K. Song
BMCBI
2005
103views more  BMCBI 2005»
13 years 8 months ago
Many accurate small-discriminatory feature subsets exist in microarray transcript data: biomarker discovery
Background: Molecular profiling generates abundance measurements for thousands of gene transcripts in biological samples such as normal and tumor tissues (data points). Given such...
Leslie Grate
TITB
2008
102views more  TITB 2008»
13 years 8 months ago
Nonlinear Support Vector Machine Visualization for Risk Factor Analysis Using Nomograms and Localized Radial Basis Function Kern
Nonlinear classifiers, e.g., support vector machines (SVMs) with radial basis function (RBF) kernels, have been used widely for automatic diagnosis of diseases because of their hig...
Baek Hwan Cho, Hwanjo Yu, Jong Shill Lee, Young Jo...
BMCBI
2005
89views more  BMCBI 2005»
13 years 8 months ago
Theme discovery from gene lists for identification and viewing of multiple functional groups
Background: High throughput methods of the genome era produce vast amounts of data in the form of gene lists. These lists are large and difficult to interpret without advanced com...
Petri Pehkonen, Garry Wong, Petri Töröne...