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BMCBI
2008
96views more  BMCBI 2008»
13 years 11 months ago
Mapping proteins to disease terminologies: from UniProt to MeSH
Background: Although the UniProt KnowledgeBase is not a medical-oriented database, it contains information on more than 2,000 human proteins involved in pathologies. However, thes...
Anaïs Mottaz, Yum Lina Yip, Patrick Ruch, Ann...
JIB
2007
75views more  JIB 2007»
13 years 10 months ago
Mapping protein information to disease terminologies
In order to improve the accessibility of genomic and proteomic information to medical researchers, we have developed a procedure to link biological information on proteins involve...
Anaïs Mottaz, Yum Lina Yip, Patrick Ruch, Ann...
CSB
2005
IEEE
142views Bioinformatics» more  CSB 2005»
14 years 4 months ago
BioMap: Discovering Schema Mapping Using Ontologies
Biologists currently devote significant time and effort searching information for their research. The wide diversity in terminology used inhibit effective computerized and manual...
Zoé Lacroix, Sumedha Gholba, Hervé M...
BMCBI
2008
147views more  BMCBI 2008»
13 years 11 months ago
Assessment of disease named entity recognition on a corpus of annotated sentences
Background: In recent years, the recognition of semantic types from the biomedical scientific literature has been focused on named entities like protein and gene names (PGNs) and ...
Antonio Jimeno-Yepes, Ernesto Jiménez-Ruiz,...
BMCBI
2008
85views more  BMCBI 2008»
13 years 11 months ago
Normalizing biomedical terms by minimizing ambiguity and variability
Background: One of the difficulties in mapping biomedical named entities, e.g. genes, proteins, chemicals and diseases, to their concept identifiers stems from the potential varia...
Yoshimasa Tsuruoka, John McNaught, Sophia Ananiado...