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BMCBI
2006
143views more  BMCBI 2006»
13 years 9 months ago
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction
Background: One of the most powerful methods for the prediction of protein structure from sequence information alone is the iterative construction of profile-type models. Because ...
Eric D. Scheeff, Philip E. Bourne
BMCBI
2006
150views more  BMCBI 2006»
13 years 9 months ago
Predicting protein subcellular locations using hierarchical ensemble of Bayesian classifiers based on Markov chains
Background: The subcellular location of a protein is closely related to its function. It would be worthwhile to develop a method to predict the subcellular location for a given pr...
Alla Bulashevska, Roland Eils
TCSV
2008
177views more  TCSV 2008»
13 years 9 months ago
An ICA Mixture Hidden Markov Model for Video Content Analysis
In this paper, a new theoretical framework based on hidden Markov model (HMM) and independent component analysis (ICA) mixture model is presented for content analysis of video, nam...
Jian Zhou, Xiao-Ping Zhang
TIP
2008
133views more  TIP 2008»
13 years 9 months ago
A Recursive Model-Reduction Method for Approximate Inference in Gaussian Markov Random Fields
This paper presents recursive cavity modeling--a principled, tractable approach to approximate, near-optimal inference for large Gauss-Markov random fields. The main idea is to su...
Jason K. Johnson, Alan S. Willsky
BMCBI
2004
208views more  BMCBI 2004»
13 years 9 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein