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HPDC
2005
IEEE
14 years 2 months ago
Recording and using provenance in a protein compressibility experiment
Very large scale computations are now becoming routinely used as a methodology to undertake scientific research. In this context, ‘provenance systems’ are regarded as the equ...
Paul T. Groth, Simon Miles, Weijian Fang, Sylvia C...
FCCM
2002
IEEE
171views VLSI» more  FCCM 2002»
14 years 1 months ago
Coarse-Grain Pipelining on Multiple FPGA Architectures
Reconfigurable systems, and in particular, FPGA-based custom computing machines, offer a unique opportunity to define application-specific architectures. These architectures offer...
Heidi E. Ziegler, Byoungro So, Mary W. Hall, Pedro...
ISCA
2007
IEEE
196views Hardware» more  ISCA 2007»
14 years 3 months ago
Anton, a special-purpose machine for molecular dynamics simulation
The ability to perform long, accurate molecular dynamics (MD) simulations involving proteins and other biological macromolecules could in principle provide answers to some of the ...
David E. Shaw, Martin M. Deneroff, Ron O. Dror, Je...
CCGRID
2003
IEEE
14 years 2 months ago
An Overlay-Network Approach for Distributed Access to SRS
SRS is a widely used system for integrating biological databases. Currently, SRS relies only on locally provided copies of these databases. In this paper we propose a mechanism th...
Thomas Fuhrmann, Andrea Schafferhans, Thure Etzol
HPCA
2002
IEEE
14 years 9 months ago
Using Complete Machine Simulation for Software Power Estimation: The SoftWatt Approach
Power dissipation has become one of the most critical factors for the continued development of both high-end and low-end computer systems. The successful design and evaluation of ...
Sudhanva Gurumurthi, Anand Sivasubramaniam, Mary J...