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» Massively-Parallel Simulation of Biochemical Systems
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GECCO
2007
Springer
180views Optimization» more  GECCO 2007»
14 years 2 months ago
Towards the coevolution of cellular automata controllers for chemical computing with the B-Z reaction
We propose that the behaviour of non-linear media can be controlled automatically through coevolutionary systems. By extension, forms of unconventional computing, i.e., massively ...
Christopher Stone, Rita Toth, Andrew Adamatzky, Be...
JCSS
2008
159views more  JCSS 2008»
13 years 7 months ago
Analysing distributed Internet worm attacks using continuous state-space approximation of process algebra models
Internet worms are classically described using SIR models and simulations, to capture the massive dynamics of the system. Here we are able to generate a differential equation-base...
Jeremy T. Bradley, Stephen T. Gilmore, Jane Hillst...
ICDCS
2011
IEEE
12 years 7 months ago
Provisioning a Multi-tiered Data Staging Area for Extreme-Scale Machines
—Massively parallel scientific applications, running on extreme-scale supercomputers, produce hundreds of terabytes of data per run, driving the need for storage solutions to im...
Ramya Prabhakar, Sudharshan S. Vazhkudai, Youngjae...
BMCBI
2010
149views more  BMCBI 2010»
13 years 8 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...
HIPC
2004
Springer
14 years 1 months ago
Performance Characteristics of a Cosmology Package on Leading HPC Architectures
Abstract. The Cosmic Microwave Background (CMB) is a snapshot of the Universe some 400,000 years after the Big Bang. The pattern of anisotropies in the CMB carries a wealth of info...
Jonathan Carter, Julian Borrill, Leonid Oliker