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» Matching Hierarchical Structures Using Association Graphs
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BIBE
2005
IEEE
115views Bioinformatics» more  BIBE 2005»
14 years 1 months ago
GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
UAI
2008
13 years 9 months ago
Discovering Cyclic Causal Models by Independent Components Analysis
We generalize Shimizu et al's (2006) ICA-based approach for discovering linear non-Gaussian acyclic (LiNGAM) Structural Equation Models (SEMs) from causally sufficient, conti...
Gustavo Lacerda, Peter Spirtes, Joseph Ramsey, Pat...
BIBE
2006
IEEE
154views Bioinformatics» more  BIBE 2006»
14 years 1 months ago
Determining Molecular Similarity for Drug Discovery using the Wavelet Riemannian Metric
Discerning the similarity between two molecules is a challenging problem in drug discovery as well as in molecular biology. The importance of this problem is due to the fact that ...
Elinor Velasquez, Emmanuel R. Yera, Rahul Singh
URBAN
2008
83views more  URBAN 2008»
13 years 7 months ago
Automatic identification of urban settlement boundaries for multiple representation databases
Intuitive and meaningful interpretation of geographical phenomena requires their representation at multiple levels of detail. This is due to the scale dependent nature of their pr...
Omair Chaudhry, William A. Mackaness
BMCBI
2010
143views more  BMCBI 2010»
13 years 8 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...