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» Maximum entropy methods for biological sequence modeling
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BIOCOMP
2009
13 years 7 months ago
Gene Expression Analysis Using Communications, Coding and Information Theory Based Models
- Identification and annotation of all the functional elements in the genome, including genes and regulatory sequences, is a fundamental challenge in genomics and computational bio...
Mohammad Al Bataineh, Lun Huang, Ismaeel Muhamed, ...
BMCBI
2008
115views more  BMCBI 2008»
13 years 9 months ago
PARPST: a PARallel algorithm to find peptide sequence tags
Background: Protein identification is one of the most challenging problems in proteomics. Tandem mass spectrometry provides an important tool to handle the protein identification ...
Sara Brunetti, Elena Lodi, Elisa Mori, Maria Stell...
CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
14 years 2 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
ISMB
2001
13 years 10 months ago
Designing fast converging phylogenetic methods
Abstract: Absolute fast converging phylogenetic reconstruction methods are provably guaranteed to recover the true tree with high probability from sequences that grow only polynomi...
Luay Nakhleh, Usman Roshan, Katherine St. John, Je...
ICIP
2005
IEEE
14 years 10 months ago
Simultaneous super-resolution for video sequences
In this work, we propose a new super-resolution algorithm to simultaneously estimate all frames of a video sequence. The new algorithm is based on the Bayesian maximum a posterior...
Joceli Mayer, Marcelo Victor Wüst Zibetti