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BMCBI
2006
141views more  BMCBI 2006»
13 years 11 months ago
Visual setup of logical models of signaling and regulatory networks with ProMoT
Background: The analysis of biochemical networks using a logical (Boolean) description is an important approach in Systems Biology. Recently, new methods have been proposed to ana...
Julio Saez-Rodriguez, Sebastian Mirschel, Rebecca ...
BMCBI
2006
111views more  BMCBI 2006»
13 years 11 months ago
Tools for integrated sequence-structure analysis with UCSF Chimera
Background: Comparing related structures and viewing the structures in the context of sequence alignments are important tasks in protein structure-function research. While many pr...
Elaine C. Meng, Eric F. Pettersen, Gregory S. Couc...
BMCBI
2006
116views more  BMCBI 2006»
13 years 11 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
CN
2007
100views more  CN 2007»
13 years 11 months ago
A simple FIFO-based scheme for differentiated loss guarantees
— Today’s Internet carries an ever broadening range of application traffic with different requirements. This has stressed its original, one-class, best-effort model, and has b...
Yaqing Huang, Roch Guérin
JODL
2006
136views more  JODL 2006»
13 years 11 months ago
MIT's CWSpace project: packaging metadata for archiving educational content in DSpace
This paper describes work in progress on the research project CWSpace, sponsored by the MIT and Microsoft Research iCampus program, to investigate the metadata standards and protoc...
William Reilly, Robert Wolfe, MacKenzie Smith