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JIB
2006
78views more  JIB 2006»
13 years 7 months ago
Prediction of transcription factor binding to DNA using rule induction methods
In this study, we seek to develop a predictive model for finding the strength of binding between a particular transcription factor (TF) variant and a particular DNA target variant...
Mikael Huss, Karin Nordström
ICMLA
2004
13 years 8 months ago
PolyCluster: an interactive visualization approach to construct classification rules
This paper introduces a system, called PolyCluster, which adopts state-of-the-art algorithms for data visualization and integrates human domain knowledge into the construction pro...
Danyu Liu, Alan P. Sprague, Jeffrey G. Gray
BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
Inferring transcriptional compensation interactions in yeast via stepwise structure equation modeling
Background: With the abundant information produced by microarray technology, various approaches have been proposed to infer transcriptional regulatory networks. However, few appro...
Grace S. Shieh, Chung-Ming Chen, Ching-Yun Yu, Jui...
RECOMB
2008
Springer
14 years 7 months ago
Bootstrapping the Interactome: Unsupervised Identification of Protein Complexes in Yeast
Protein interactions and complexes are major components of biological systems. Recent genome-wide applications of tandem affinity purification (TAP) in yeast have increased signifi...
Caroline C. Friedel, Jan Krumsiek, Ralf Zimmer
SIGMETRICS
2004
ACM
105views Hardware» more  SIGMETRICS 2004»
14 years 16 days ago
A model of BGP routing for network engineering
The performance of IP networks depends on a wide variety of dynamic conditions. Traffic shifts, equipment failures, planned maintenance, and topology changes in other parts of th...
Nick Feamster, Jared Winick, Jennifer Rexford