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BMCBI
2006
110views more  BMCBI 2006»
13 years 10 months ago
Design of a combinatorial DNA microarray for protein-DNA interaction studies
Background: Discovery of precise specificity of transcription factors is an important step on the way to understanding the complex mechanisms of gene regulation in eukaryotes. Rec...
Julian Mintseris, Michael B. Eisen
BMCBI
2005
246views more  BMCBI 2005»
13 years 10 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
PVLDB
2008
111views more  PVLDB 2008»
13 years 10 months ago
Approximate lineage for probabilistic databases
In probabilistic databases, lineage is fundamental to both query processing and understanding the data. Current systems s.a. Trio or Mystiq use a complete approach in which the li...
Christopher Ré, Dan Suciu
ICANN
2007
Springer
14 years 5 months ago
Structure Learning with Nonparametric Decomposable Models
Abstract. We present a novel approach to structure learning for graphical models. By using nonparametric estimates to model clique densities in decomposable models, both discrete a...
Anton Schwaighofer, Mathäus Dejori, Volker Tr...
BMCBI
2010
105views more  BMCBI 2010»
13 years 11 months ago
Evaluation of fecal mRNA reproducibility via a marginal transformed mixture modeling approach
Background: Developing and evaluating new technology that enables researchers to recover gene-expression levels of colonic cells from fecal samples could be key to a non-invasive ...
Nysia I. George, Joanne R. Lupton, Nancy D. Turner...