: In this paper, we document our efforts in participating to the TREC 2007 Legal track. We had multiple aims: First, to experiment with using different query formulations, trying t...
Avi Arampatzis, Jaap Kamps, Martijn Kooken, Nir Nu...
Background: Biologically active sequence motifs often have positional preferences with respect to a genomic landmark. For example, many known transcription factor binding sites (T...
Nak-Kyeong Kim, Kannan Tharakaraman, Leonardo Mari...
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
A TOPS diagram is a simplified description of the topology of a protein using a graph where nodes are α-helices and β-strands, and edges correspond to chirality relations and p...
In the paper, we propose a general method for statistical performance evaluation. The method incorporates various statistical metrics and automatically selects an appropriate stat...