Modeling in systems biology is concerned with using experimental information and mathematical methods to build quantitative models at different biological scales. This requires int...
Zhouyang Sun, Anthony Finkelstein, Jonathan Ashmor...
The Gene Ontology (GO) is a controlled vocabulary of terms to describe protein functions. It also includes a hierarchical description of the relationships among the terms in the f...
Previous works on information extraction from tables make use of prior knowledge such as a cognition model of tables or lexical knowledge bases for specific domains. However, we ...
Abstract. This paper proposes a novel Ant Colony Optimisation algorithm for the hierarchical problem of predicting protein functions using the Gene Ontology (GO). The GO structure ...
Fernando E. B. Otero, Alex Alves Freitas, Colin G....
We present a method for acquiring ontological knowledge using search query logs. We first use query logs to identify important contexts associated with terms belonging to a semant...