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» Methods in biomedical ontology
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BIBM
2008
IEEE
107views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
Multiway Clustering for Creating Biomedical Term Sets
We present an EM-based clustering method that can be used for constructing or augmenting ontologies such as MeSH. Our algorithm simultaneously clusters verbs and nouns using both ...
Vasileios Kandylas, Lyle H. Ungar, Ted Sandler, Sh...
DILS
2008
Springer
13 years 9 months ago
Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues
In this presentation, we review some examples of successful biomedical data integration projects in which ontologies play an important role, including the integration of genomic da...
Olivier Bodenreider
BMCBI
2005
153views more  BMCBI 2005»
13 years 7 months ago
Learning Statistical Models for Annotating Proteins with Function Information using Biomedical Text
Background: The BioCreative text mining evaluation investigated the application of text mining methods to the task of automatically extracting information from text in biomedical ...
Soumya Ray, Mark Craven
BMCBI
2010
87views more  BMCBI 2010»
13 years 7 months ago
Relations as patterns: bridging the gap between OBO and OWL
Background: Most biomedical ontologies are represented in the OBO Flatfile Format, which is an easy-to-use
Robert Hoehndorf, Anika Oellrich, Michel Dumontier...
BIRD
2007
Springer
168views Bioinformatics» more  BIRD 2007»
13 years 11 months ago
Ontology-Based MEDLINE Document Classification
Abstract. An increasing and overwhelming amount of biomedical information is available in the research literature mainly in the form of free-text. Biologists need tools that automa...
Fabrice Camous, Stephen Blott, Alan F. Smeaton