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BMCBI
2010
150views more  BMCBI 2010»
13 years 7 months ago
MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure
Background: The reconstruction of protein complexes from the physical interactome of organisms serves as a building block towards understanding the higher level organization of th...
Sriganesh Srihari, Kang Ning, Hon Wai Leong
CORR
2008
Springer
121views Education» more  CORR 2008»
13 years 7 months ago
Rate-Distortion via Markov Chain Monte Carlo
We propose an approach to lossy source coding, utilizing ideas from Gibbs sampling, simulated annealing, and Markov Chain Monte Carlo (MCMC). The idea is to sample a reconstructio...
Shirin Jalali, Tsachy Weissman
BMCBI
2007
160views more  BMCBI 2007»
13 years 7 months ago
Identifying protein complexes directly from high-throughput TAP data with Markov random fields
Background: Predicting protein complexes from experimental data remains a challenge due to limited resolution and stochastic errors of high-throughput methods. Current algorithms ...
Wasinee Rungsarityotin, Roland Krause, Arno Sch&ou...
PVLDB
2010
110views more  PVLDB 2010»
13 years 6 months ago
Graph Homomorphism Revisited for Graph Matching
In a variety of emerging applications one needs to decide whether a graph G matches another Gp, i.e., whether G has a topological structure similar to that of Gp. The traditional ...
Wenfei Fan, Jianzhong Li, Shuai Ma, Hongzhi Wang, ...
ICPR
2010
IEEE
13 years 7 months ago
Improved Mean Shift Algorithm with Heterogeneous Node Weights
The conventional mean shift algorithm has been known to be sensitive to selecting a bandwidth. We present a robust mean shift algorithm with heterogeneous node weights that come f...
Ji Won Yoon, Simon P. Wilson