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2000
13 years 9 months ago
Analysis of Gene Expression Microarrays for Phenotype Classification
Several microarray technologies that monitor the level of expression of a large number of genes have recently emerged. Given DNA-microarray data for a set of cells characterized b...
Andrea Califano, Gustavo Stolovitzky, Yuhai Tu
BMCBI
2005
178views more  BMCBI 2005»
13 years 7 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
BMCBI
2008
126views more  BMCBI 2008»
13 years 7 months ago
Methods for evaluating gene expression from Affymetrix microarray datasets
Background: Affymetrix high density oligonucleotide expression arrays are widely used across all fields of biological research for measuring genome-wide gene expression. An import...
Ning Jiang, Lindsey J. Leach, Xiaohua Hu, Elena Po...
JMLR
2010
161views more  JMLR 2010»
13 years 2 months ago
Accuracy-Rejection Curves (ARCs) for Comparing Classification Methods with a Reject Option
Data extracted from microarrays are now considered an important source of knowledge about various diseases. Several studies based on microarray data and the use of receiver operat...
Malik Sajjad Ahmed Nadeem, Jean-Daniel Zucker, Bla...
CSDA
2008
128views more  CSDA 2008»
13 years 7 months ago
Assessing agreement of clustering methods with gene expression microarray data
In the rapidly evolving field of genomics, many clustering and classification methods have been developed and employed to explore patterns in gene expression data. Biologists face...
Xueli Liu, Sheng-Chien Lee, George Casella, Gary F...