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» Minimization of an M-convex Function
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ICGA
1997
122views Optimization» more  ICGA 1997»
13 years 9 months ago
A Comparison of Global and Local Search Methods in Drug Docking
Molecular docking software makes computational predictions of the interaction of molecules. This can be useful, for example, in evaluating the binding of candidate drug molecules ...
Christopher D. Rosin, R. Scott Halliday, William E...
GECCO
2010
Springer
186views Optimization» more  GECCO 2010»
13 years 9 months ago
Genetic rule extraction optimizing brier score
Most highly accurate predictive modeling techniques produce opaque models. When comprehensible models are required, rule extraction is sometimes used to generate a transparent mod...
Ulf Johansson, Rikard König, Lars Niklasson
APAL
2007
78views more  APAL 2007»
13 years 8 months ago
Partial Horn logic and cartesian categories
A logic is developed in which function symbols are allowed to represent partial functions. It has the usual rules of logic (in the form of a sequent calculus) except that the subs...
Erik Palmgren, Steven J. Vickers
BMCBI
2010
143views more  BMCBI 2010»
13 years 8 months ago
An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location inf
Background: Graph drawing is one of the important techniques for understanding biological regulations in a cell or among cells at the pathway level. Among many available layout al...
Kaname Kojima, Masao Nagasaki, Satoru Miyano
BMCBI
2010
202views more  BMCBI 2010»
13 years 8 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader