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BMCBI
2006
166views more  BMCBI 2006»
13 years 7 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
KDD
2006
ACM
142views Data Mining» more  KDD 2006»
14 years 8 months ago
Automatic mining of fruit fly embryo images
We present FEMine, an automatic system for image-based gene expression analysis. We perform experiments on the largest publicly available collection of Drosophila ISH (in situ hyb...
Jia-Yu Pan, André G. R. Balan, Eric P. Xing...
BMCBI
2006
160views more  BMCBI 2006»
13 years 7 months ago
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation
Background: The high-density oligonucleotide microarray (GeneChip) is an important tool for molecular biological research aiming at large-scale detection of small nucleotide polym...
Leandro Hermida, Olivier Schaad, Philippe Demougin...
RECOMB
2003
Springer
14 years 7 months ago
Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species
In [13] we reported the genome sequences of S. paradoxus, S. mikatae and S. bayanus and compared these three yeast species to their close relative, S. cerevisiae. Genome-wide comp...
Manolis Kamvysselis, Nick Patterson, Bruce Birren,...
BMCBI
2005
179views more  BMCBI 2005»
13 years 7 months ago
MARS: Microarray analysis, retrieval, and storage system
Background: Microarray analysis has become a widely used technique for the study of geneexpression patterns on a genomic scale. As more and more laboratories are adopting microarr...
Michael Maurer, Robert Molidor, Alexander Sturn, J...