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BMCBI
2005
117views more  BMCBI 2005»
13 years 10 months ago
Differentiation of regions with atypical oligonucleotide composition in bacterial genomes
Background: Complete sequencing of bacterial genomes has become a common technique of present day microbiology. Thereafter, data mining in the complete sequence is an essential st...
Oleg N. Reva, Burkhard Tümmler
BMCBI
2006
166views more  BMCBI 2006»
13 years 11 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2010
96views more  BMCBI 2010»
13 years 11 months ago
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
Background: Chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing (ChIP-seq) or ChIP followed by genome tiling array analysis (ChIP-chip) have become standar...
Lihua J. Zhu, Claude Gazin, Nathan D. Lawson, Herv...
ROCAI
2004
Springer
14 years 4 months ago
Learning Mixtures of Localized Rules by Maximizing the Area Under the ROC Curve
We introduce a model class for statistical learning which is based on mixtures of propositional rules. In our mixture model, the weight of a rule is not uniform over the entire ins...
Tobias Sing, Niko Beerenwinkel, Thomas Lengauer
KDD
1998
ACM
140views Data Mining» more  KDD 1998»
14 years 3 months ago
Blurring the Distinction between Command and Data in Scientific KDD
We have been working on two different KDD systems for scientific data. One system involves comparative genomics, where the database contains more than 60,000 plant gene and protei...
John V. Carlis, Elizabeth Shoop, Scott Krieger