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BMCBI
2008
105views more  BMCBI 2008»
13 years 7 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...
ISMIS
2005
Springer
14 years 1 months ago
Towards Ad-Hoc Rule Semantics for Gene Expression Data
The notion of rules is very popular and appears in different flavors, for example as association rules in data mining or as functional (or multivalued) dependencies in databases. ...
Marie Agier, Jean-Marc Petit, Einoshin Suzuki
BMCBI
2005
89views more  BMCBI 2005»
13 years 7 months ago
Theme discovery from gene lists for identification and viewing of multiple functional groups
Background: High throughput methods of the genome era produce vast amounts of data in the form of gene lists. These lists are large and difficult to interpret without advanced com...
Petri Pehkonen, Garry Wong, Petri Töröne...
APBC
2003
120views Bioinformatics» more  APBC 2003»
13 years 9 months ago
From Informatics to Bioinformatics
Informatics has helped in launching molecular biology into the genomic era. It appears certain that informatics will continue to be a major factor in the success of molecular biol...
Vladimir B. Bajic, Vladimir Brusic, Jinyan Li, See...
KDD
2003
ACM
133views Data Mining» more  KDD 2003»
14 years 8 months ago
Interactive Analysis of Gene Interactions Using Graphical gaussian model
DNA microarray provides a powerful basis for analysis of gene expression. Data mining methods such as clustering have been widely applied to microarray data to link genes that sho...
Xintao Wu, Yong Ye, Kalpathi R. Subramanian