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BMCBI
2010
190views more  BMCBI 2010»
13 years 9 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
SAC
2003
ACM
14 years 2 months ago
Supervised Term Weighting for Automated Text Categorization
The construction of a text classifier usually involves (i) a phase of term selection, in which the most relevant terms for the classification task are identified, (ii) a phase ...
Franca Debole, Fabrizio Sebastiani
BMCBI
2006
143views more  BMCBI 2006»
13 years 8 months ago
IsoSVM - Distinguishing isoforms and paralogs on the protein level
Background: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred...
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Al...
BMCBI
2005
117views more  BMCBI 2005»
13 years 8 months ago
An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
Background: The Gene Ontology Annotation (GOA) database http://www.ebi.ac.uk/GOA aims to provide high-quality supplementary GO annotation to proteins in the UniProt Knowledgebase....
Evelyn Camon, Daniel Barrell, Emily Dimmer, Vivian...
JMLR
2006
131views more  JMLR 2006»
13 years 8 months ago
On Representing and Generating Kernels by Fuzzy Equivalence Relations
Kernels are two-placed functions that can be interpreted as inner products in some Hilbert space. It is this property which makes kernels predestinated to carry linear models of l...
Bernhard Moser