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BMCBI
2004
146views more  BMCBI 2004»
13 years 7 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
GECCO
2006
Springer
202views Optimization» more  GECCO 2006»
13 years 11 months ago
Inference of genetic networks using S-system: information criteria for model selection
In this paper we present an evolutionary approach for inferring the structure and dynamics in gene circuits from observed expression kinetics. For representing the regulatory inte...
Nasimul Noman, Hitoshi Iba
CIBCB
2007
IEEE
13 years 11 months ago
Genetic Regulatory Network Modeling Using Network Component Analysis and Fuzzy Clustering
Gene regulatory network model is the most widely used mechanism to model and predict the behavior of living organisms. Network Component Analysis (NCA) as an emerging issue for unc...
Fatemeh Bakouie, Mohammad Hassan Moradi
CORR
2010
Springer
151views Education» more  CORR 2010»
13 years 7 months ago
On the Convexity of Latent Social Network Inference
In many real-world scenarios, it is nearly impossible to collect explicit social network data. In such cases, whole networks must be inferred from underlying observations. Here, w...
Seth A. Myers, Jure Leskovec
ESANN
2006
13 years 8 months ago
LS-SVM functional network for time series prediction
Usually time series prediction is done with regularly sampled data. In practice, however, the data available may be irregularly sampled. In this case the conventional prediction me...
Tuomas Kärnä, Fabrice Rossi, Amaury Lend...