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JBCB
2007
44views more  JBCB 2007»
13 years 10 months ago
Modeling Classic Attenuation Regulation of gene Expression in bacteria
Vassily A. Lyubetsky, Sergey A. Pirogov, Lev I. Ru...
AB
2007
Springer
14 years 5 months ago
Attenuation Regulation as a Term Rewriting System
Abstract The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an...
Eugene Asarin, Thierry Cachat, Alexander Seliverst...
ALIFE
2008
13 years 11 months ago
A Model of the Quorum Sensing System in Vibrio fischeri Using P Systems
Quorum sensing is a cell density dependent gene regulation system that allows an entire population of bacterial cells to communicate in order to regulate the expression of certain ...
Francisco José Romero-Campero, Mario J. P&e...
HYBRID
2004
Springer
14 years 4 months ago
Modeling Subtilin Production in Bacillus subtilis Using Stochastic Hybrid Systems
The genetic network regulating the biosynthesis of subtilin in Bacillus subtilis is modeled as a stochastic hybrid system. The continuous state of the hybrid system is the concentr...
Jianghai Hu, Wei Chung Wu, Shankar Sastry
CANDC
2004
ACM
13 years 10 months ago
The difficult interpretation of transcriptome data: the case of the GATC regulatory network
Genomic analyses on part of Escherichia coli's chromosome had suggested the existence of a GATC regulated network. This has recently been confirmed through a transcriptome an...
Alessandra Riva, Marie-Odile Delorme, Tony Chevali...