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    BMCBI
    2010
    112views more  BMCBI 2010»
    A parameter-adaptive dynamic programming approach for inferring cophylogenies
    13 years 9 months ago
    A parameter-adaptive dynamic programming approach for inferring cophylogenies
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    Background: Coevolutionary systems like hosts and their parasites are commonly used model systems for evolutionary studies. Inferring the coevolutionary history based on given phy...
    Daniel Merkle, Martin Middendorf, Nicolas Wieseke
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    BMCBI
    2008
    135views more  BMCBI 2008»
    Inferring the role of transcription factors in regulatory networks
    13 years 9 months ago
    Inferring the role of transcription factors in regulatory networks
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    Background: Expression profiles obtained from multiple perturbation experiments are increasingly used to reconstruct transcriptional regulatory networks, from well studied, simple...
    Philippe Veber, Carito Guziolowski, Michel Le Borg...
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    BMCBI
    2008
    132views more  BMCBI 2008»
    The Average Mutual Information Profile as a Genomic Signature
    13 years 9 months ago
    The Average Mutual Information Profile as a Genomic Signature
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    Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
    Mark Bauer, Sheldon M. Schuster, Khalid Sayood
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    BMCBI
    2008
    160views more  BMCBI 2008»
    Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
    13 years 9 months ago
    Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
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    Background: The variety of DNA microarray formats and datasets presently available offers an unprecedented opportunity to perform insightful comparisons of heterogeneous data. Cro...
    Alexandre Kuhn, Ruth Luthi-Carter, Mauro Delorenzi
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    ALIFE
    2006
    95views Modeling And Simulation» more  ALIFE 2006»
    Picture This: The State of the Art in Visualization for Complex Adaptive Systems
    13 years 9 months ago
    Picture This: The State of the Art in Visualization for Complex Adaptive Systems
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    Visualization has an increasingly important role to play in scientific research. Moreover, visualization has a special role to play within artificial life as a result of the inform...
    Seth Bullock, Tom Smith, Jon Bird
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