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BMCBI
2010
154views more  BMCBI 2010»
13 years 11 months ago
Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
Edon Sung, Sangsoo Kim, Whanchul Shin
FCCM
2003
IEEE
96views VLSI» more  FCCM 2003»
14 years 4 months ago
Data Search and Reorganization Using FPGAs: Application to Spatial Pointer-based Data Structures
FPGAs have appealing features such as customizable internal and external bandwidth and the ability to exploit vast amounts of fine-grain parallelism. In this paper we explore the ...
Pedro C. Diniz, Joonseok Park
MMB
2010
Springer
194views Communications» more  MMB 2010»
14 years 3 months ago
Searching for Tight Performance Bounds in Feed-Forward Networks
Abstract. Computing tight performance bounds in feed-forward networks under general assumptions about arrival and server models has turned out to be a challenging problem. Recently...
Andreas Kiefer, Nicos Gollan, Jens B. Schmitt
WSC
1997
14 years 8 days ago
Simulation of Computer Systems and Applications
The modeling of computer systems, particularly distributed systems, is presented with an emphasis on the system characteristics that are important to the model and some general me...
William S. Keezer
STOC
2006
ACM
166views Algorithms» more  STOC 2006»
14 years 11 months ago
New upper and lower bounds for randomized and quantum local search
Local Search problem, which finds a local minimum of a black-box function on a given graph, is of both practical and theoretical importance to combinatorial optimization, complexi...
Shengyu Zhang