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BMCBI
2005
306views more  BMCBI 2005»
13 years 7 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
DAC
2005
ACM
14 years 9 months ago
Robust gate sizing by geometric programming
We present an efficient optimization scheme for gate sizing in the presence of process variations. Using a posynomial delay model, the delay constraints are modified to incorporat...
Jaskirat Singh, Vidyasagar Nookala, Zhi-Quan Luo, ...
ICS
2010
Tsinghua U.
14 years 21 days ago
Handling task dependencies under strided and aliased references
The emergence of multicore processors has increased the need for simple parallel programming models usable by nonexperts. The ability to specify subparts of a bigger data structur...
Josep M. Pérez, Rosa M. Badia, Jesús...
ESSMAC
2003
Springer
14 years 1 months ago
Analysis of Some Methods for Reduced Rank Gaussian Process Regression
Abstract. While there is strong motivation for using Gaussian Processes (GPs) due to their excellent performance in regression and classification problems, their computational com...
Joaquin Quiñonero Candela, Carl Edward Rasm...
BMCBI
2008
164views more  BMCBI 2008»
13 years 8 months ago
Word correlation matrices for protein sequence analysis and remote homology detection
Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
Thomas Lingner, Peter Meinicke