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JUCS
2010
215views more  JUCS 2010»
13 years 3 months ago
A Multidisciplinary Survey of Computational Techniques for the Modelling, Simulation and Analysis of Biochemical Networks
: All processes of life are controlled by networks of interacting biochemical components. The purpose of modelling these networks is manifold. From a theoretical point of view it a...
James Decraene, Thomas Hinze
BMCBI
2008
174views more  BMCBI 2008»
13 years 8 months ago
Evolutionary approaches for the reverse-engineering of gene regulatory networks: A study on a biologically realistic dataset
Background: Inferring gene regulatory networks from data requires the development of algorithms devoted to structure extraction. When only static data are available, gene interact...
Cédric Auliac, Vincent Frouin, Xavier Gidro...
CMSB
2011
Springer
12 years 8 months ago
The singular power of the environment on stochastic nonlinear threshold Boolean automata networks
Abstract. This paper tackles theoretically the question of the structural stability of biological regulation networks subjected to the influence of their environment. The model of...
Jacques Demongeot, Sylvain Sené
IWANN
2009
Springer
14 years 3 months ago
Development of Neural Network Structure with Biological Mechanisms
We present an evolving neural network model in which synapses appear and disappear stochastically according to bio-inspired probabilities. These are in general nonlinear functions ...
Samuel Johnson, Joaquín Marro, Jorge F. Mej...
GCB
2009
Springer
154views Biometrics» more  GCB 2009»
14 years 14 days ago
Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks
Abstract: It is often challenging to reconstruct accurately a complete dynamic biological network due to the scarcity of data collected in cost-effective experiments. This paper ad...
Zhengyu Ouyang, Mingzhou Song