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BMCBI
2004
323views more  BMCBI 2004»
13 years 9 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
CIBCB
2007
IEEE
14 years 3 months ago
Modeling protein-DNA binding time in Stochastic Discrete Event Simulation of Biological Processes
Abstract— This paper presents a parametric model to estimate the DNA-protein binding time using the DNA and protein structures and details of the binding site. To understand the ...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...
COMPLEXITY
2010
120views more  COMPLEXITY 2010»
13 years 6 months ago
The complexity of partition tasks
In this paper we introduce the Partition Task problem class along with a complexity measure to evaluate its instances and a performance measure to quantify the ability of a system...
Fernando Eesponda, Matías Vera-Cruz, Jorge ...
ISMVL
2003
IEEE
111views Hardware» more  ISMVL 2003»
14 years 2 months ago
Modeling Multi-Valued Circuits in SystemC
The complexity of todays hardware systems steadily increases. Due to this fact new ways of efficiently describing systems are investigated. A very promising approach in this area...
Daniel Große, Görschwin Fey, Rolf Drech...
CEEMAS
2007
Springer
14 years 1 months ago
Governing Environments for Agent-Based Traffic Simulations
Multiagent systems may be elegantly modeled and designed by enhancing the role of the environment in which agents evolve. In particular, the environment may have the role of a gove...
Michael Schumacher, Laurent Grangier, Radu Jurca