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» Modeling interleaved hidden processes
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PAKDD
2009
ACM
126views Data Mining» more  PAKDD 2009»
14 years 5 months ago
Tree-Based Method for Classifying Websites Using Extended Hidden Markov Models
One important problem proposed recently in the field of web mining is website classification problem. The complexity together with the necessity to have accurate and fast algorit...
Majid Yazdani, Milad Eftekhar, Hassan Abolhassani
BMCBI
2006
143views more  BMCBI 2006»
13 years 11 months ago
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction
Background: One of the most powerful methods for the prediction of protein structure from sequence information alone is the iterative construction of profile-type models. Because ...
Eric D. Scheeff, Philip E. Bourne
BMCBI
2010
105views more  BMCBI 2010»
13 years 11 months ago
Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement
Background: The Medium-chain Dehydrogenases/Reductases (MDR) form a protein superfamily whose size and complexity defeats traditional means of subclassification; it currently has ...
Joel Hedlund, Hans Jörnvall, Bengt Persson
BMCBI
2005
87views more  BMCBI 2005»
13 years 10 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
BMCBI
2005
114views more  BMCBI 2005»
13 years 10 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio