Background: The PD-(D/E)XK nuclease superfamily, initially identified in type II restriction endonucleases and later in many enzymes involved in DNA recombination and repair, is o...
Co-clustering can be viewed as a two-way (bilinear) factorization of a large data matrix into dense/uniform and possibly overlapping submatrix factors (co-clusters). This combinat...
Hao Zhu, Gonzalo Mateos, Georgios B. Giannakis, Ni...
Abstract. Multiple sequence alignment is a key process in today’s biology, and finding a relevant alignment of several sequences is much more challenging than just optimizing so...
Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
We investigate the numerical solution of large-scale Lyapunov equations with the sign function method. Replacing the usual matrix inversion, addition, and multiplication by format...