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151
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SADM
2010
173views more  SADM 2010»
14 years 9 months ago
Data reduction in classification: A simulated annealing based projection method
This paper is concerned with classifying high dimensional data into one of two categories. In various settings, such as when dealing with fMRI and microarray data, the number of v...
Tian Siva Tian, Rand R. Wilcox, Gareth M. James
CSB
2002
IEEE
169views Bioinformatics» more  CSB 2002»
15 years 7 months ago
Bayesian Network and Nonparametric Heteroscedastic Regression for Nonlinear Modeling of Genetic Network
We propose a new statistical method for constructing a genetic network from microarray gene expression data by using a Bayesian network. An essential point of Bayesian network con...
Seiya Imoto, SunYong Kim, Takao Goto, Sachiyo Abur...
145
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BMCBI
2006
101views more  BMCBI 2006»
15 years 2 months ago
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
Background: The development of algorithms to infer the structure of gene regulatory networks based on expression data is an important subject in bioinformatics research. Validatio...
Tim Van den Bulcke, Koen Van Leemput, Bart Naudts,...
115
Voted
ICML
2007
IEEE
16 years 3 months ago
Piecewise pseudolikelihood for efficient training of conditional random fields
Discriminative training of graphical models can be expensive if the variables have large cardinality, even if the graphical structure is tractable. In such cases, pseudolikelihood...
Charles A. Sutton, Andrew McCallum
113
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ECML
2007
Springer
15 years 8 months ago
Spectral Clustering and Embedding with Hidden Markov Models
Abstract. Clustering has recently enjoyed progress via spectral methods which group data using only pairwise affinities and avoid parametric assumptions. While spectral clustering ...
Tony Jebara, Yingbo Song, Kapil Thadani