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» Models and Methods in Comparative Genomics
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BMCBI
2010
150views more  BMCBI 2010»
13 years 8 months ago
Kernel based methods for accelerated failure time model with ultra-high dimensional data
Background: Most genomic data have ultra-high dimensions with more than 10,000 genes (probes). Regularization methods with L1 and Lp penalty have been extensively studied in survi...
Zhenqiu Liu, Dechang Chen, Ming Tan, Feng Jiang, R...
BMCBI
2006
161views more  BMCBI 2006»
13 years 11 months ago
A method for rapid similarity analysis of RNA secondary structures
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
Na Liu, Tianming Wang
BMCBI
2006
119views more  BMCBI 2006»
13 years 11 months ago
Hidden Markov Model Variants and their Application
Markov statistical methods may make it possible to develop an unsupervised learning process that can automatically identify genomic structure in prokaryotes in a comprehensive way...
Stephen Winters-Hilt
LREC
2008
141views Education» more  LREC 2008»
14 years 11 days ago
A Comparative Study on Language Identification Methods
In this paper we present two experiments conducted for comparison of different language identification algorithms. Short words-, frequent words- and n-gram-based approaches are co...
Lena Grothe, Ernesto William De Luca, Andreas N&uu...
BIBE
2004
IEEE
14 years 2 months ago
Phylogenetic Reconstruction from Arbitrary Gene-Order Data
Phylogenetic reconstruction from gene-order data has attracted attention from both biologists and computer scientists over the last few years. So far, our software suite GRAPPA is...
Jijun Tang, Bernard M. E. Moret, Liying Cui, Claud...